Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936678.1_cds_XP_016482175.1_73429
CDS Infomation

[gene=LOC107803082] [db_xref=GeneID:107803082] [protein=LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1] [protein_id=XP_016482175.1] [location=complement(join(26955..27934,28014..28244,28631..28672,28791..29511))] [gbkey=CDS]
Sequence

ATGGCTTCTACTTTCTTGTTTTTGTGTTGTTTACTGATCTTTAACCTATCTCAACTACAA
GGTAACTCCAAATCCAACTGCACCGAGGAATTCGAGTGCGGAAATCTTGGAGTTATGAAG
TTTCCTTTCACAAATTCTAGCAACCCCGAGTGCGGATTATACAAGTTTGATTGTCAGGCT
AAACCATATCCAAAGATTGAATTTGGTAAACACAAGTATGATGCTTTAGTGAAGAAGAGT
GATTTTTTCCTTCTTTCAGATCCTGAGTTTCAGAACTACTTAGAAAAAAATAGTTGCAAG
TCTTTTGACAAAAAATTCTTATTTCCAAACTCCCCTTTGATTTCTTTCCAAATTATTCCT
AACTTAACTTTGTACAGATGCAACCATAGTCAGGACATCATGCAAAAGAAAACTGATGCC
CTTTTTCATGATTTTGAGAAATACAGTGAGTGTAAAGATTTCAATGTCTATTATCATCAT
CCCATTAAAACATTGGGAAATTCTAGTCATAAGATAAGTGGCAAACTTCCAGATCACTGT
TCAATTGTACAATTGCCAATTCCTTTGCCTACACCATCAAAACCATATGCTAGTAACTTG
TTTGAACTGTTGACTTCTAATATTCTTCTAGAATGGGAGTTGTCTAAAGATTGTCATCAC
TGTCTTGACAAAGGAGGGAAATGCCTGATCGGTCGCGAACACAAATTTCATTGTTCCAAA
GGAAAAAGAGGAAAAAGTAAGCTGAGAATGCTTCTGGCTGCAGTTTTTGGTGGAGTAGGT
TTGATCCTAGTATCTTCCATTATCATCCTCTCTATCTGGCGTCGCAAGAGAGGGAGGAAT
GGTTCTACACAATTTCGTCGGGAGCTTGAGGTAGAGAGCAGATATTTTGGATTTCAGGTT
CCAGTTTTTTCCTATGCTGAACTTAAAGAAGCCACCAACAATTTTGATCCCTCTAATGAG
CTTGGAGATGGAGGTTTTGGAACTGTATATTATGGAAAACTATATGATGGAAGAGAAGTT
GCAGTAAAATGCCTATATGAGCACAACTGCAAGAGAATGCAACAGTTCATAAATGAAATC
GAAATCCTTACTCGTTTGAGGCACCAAAATCTTGTGTCTCTTTATGGCTGCACATCAAGA
CGAAGCCGTGAACTTCTCCTTGTTTATGAATACATTCCTAATGGAACAGTTGCTGATCAT
CTCAACGGTGAAGGAGCAGAAGAGGGATTGCTCACGTGGCCAATCCGTATGAGTATTGCA
GTAGAAACAGCCAGTGCATTGGCCTACCTCCATGCTTCTGATGTGATACATCGCGATGTC
AAGACTAATAACATTCTTCTTGACGATAACTTTCGTGTCAAAGTTGCAGATTTTGGGCTG
TCAAGACTTTTTCCTAACGACGTTTCTCACATATCCACTGCTCCTCAAGGGACACCAGGA
TACGTCGATCCTGAGTATCATGAATGTTATCAACTTACTGACAAAAGTGACGTTTATAGT
TTCGGGGTTGTCCTTATCGAGCTGATATCATCAATGCCAGCTGTGGACATAACTAGGCAT
AAGCATGAGATCAATTTGGCTAACTTGGCGATAAACAGGATACAAAGATGTGCATTTAAT
GAACTGATTGATCCATCTCTCGGGTTTACATCAGATACACTTGTTAAGAGAATGACTATC
TCTGTCGCAAAGCTAGCTTTTCGATGCTTGCAACTTGAGAAAGATATCAGGCCAACAATG
GATGAAGTATTGGACATTTTGAGAAATATTCAGAGTGGAAAATTCCAAAATGAGAAGACA
TTTGAGACTAGTGCCAGTTTTAACTTAATCAAGTCTAAGAGTGTTAATATCCCTCCTTTT
TCGCCTGAATCAGATGAAGTTGCACTGCTCAAGAAAGTTAAGTTCTTAAGTCCATCAGTT
ACTAATAGTGAGATATGGATTAGTGGCTCTACTACAACCAGCACAAGTGAGTGA

Peptide Sequence

PEP ID

XP_016482175.1
PEP Infomation

PREDICTED: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1 [Nicotiana tabacum]
Sequence

MASTFLFLCCLLIFNLSQLQGNSKSNCTEEFECGNLGVMKFPFTNSSNPECGLYKFDCQA
KPYPKIEFGKHKYDALVKKSDFFLLSDPEFQNYLEKNSCKSFDKKFLFPNSPLISFQIIP
NLTLYRCNHSQDIMQKKTDALFHDFEKYSECKDFNVYYHHPIKTLGNSSHKISGKLPDHC
SIVQLPIPLPTPSKPYASNLFELLTSNILLEWELSKDCHHCLDKGGKCLIGREHKFHCSK
GKRGKSKLRMLLAAVFGGVGLILVSSIIILSIWRRKRGRNGSTQFRRELEVESRYFGFQV
PVFSYAELKEATNNFDPSNELGDGGFGTVYYGKLYDGREVAVKCLYEHNCKRMQQFINEI
EILTRLRHQNLVSLYGCTSRRSRELLLVYEYIPNGTVADHLNGEGAEEGLLTWPIRMSIA
VETASALAYLHASDVIHRDVKTNNILLDDNFRVKVADFGLSRLFPNDVSHISTAPQGTPG
YVDPEYHECYQLTDKSDVYSFGVVLIELISSMPAVDITRHKHEINLANLAINRIQRCAFN
ELIDPSLGFTSDTLVKRMTISVAKLAFRCLQLEKDIRPTMDEVLDILRNIQSGKFQNEKT
FETSASFNLIKSKSVNIPPFSPESDEVALLKKVKFLSPSVTNSEIWISGSTTTSTSE

Transcript Sequence

Gene sequence data has not been registered.